Gene Function Search

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HelpThis tool allows users to search for genes from various datasets available in GDC (Genomic Database for Cannabis). Users can search for genes and transcripts predicted from whole genome assemblies by accession, name, location, and/or function keyword. For keyword, enter any protein name of homologs, GO term, or InterPro term. A query is constrained by all selected items from the available options. The C. sativa assembly and annotation items are used for genes/transcripts not associated with a specific assembly (e.g. GenBank or Uniprot curated genes). The lookup table for chromosome name to NCBI sequence accession ID is available here
Genome assembly
Annotation
Chromosome/Contig
between
and
Gene/Transcript Name/Accession
Keyword
(eg. terpene, cannabidiolic, ATP binding, zinc finger)

 

Gene data sources and licences

Data

Source

Licence

cs10

NCBI RefSeq GCF_900626175.2

NCBI data usage policy

pkv5

SCU

Creative Commons BY 4.0